Building with latest from git produces...
------
$ ./autogen_fddnm.sh
'../../AUTHORS' -> './AUTHORS'
'../../COPYING' -> './COPYING'
autoreconf: Entering directory `.'
autoreconf: configure.ac: not using Gettext
autoreconf: running: aclocal --force -I m4 --install
aclocal: overwriting 'm4/ax_boost_base.m4' with
'/usr/share/aclocal/ax_boost_base.m4'
aclocal: overwriting 'm4/ax_boost_program_options.m4' with
'/usr/share/aclocal/ax_boost_program_options.m4'
aclocal: overwriting 'm4/ax_boost_system.m4' with
'/usr/share/aclocal/ax_boost_system.m4'
aclocal: installing 'm4/ax_cxx_compile_stdcxx.m4' from
'/usr/share/aclocal/ax_cxx_compile_stdcxx.m4'
aclocal: overwriting 'm4/ax_cxx_compile_stdcxx_11.m4' with
'/usr/share/aclocal/ax_cxx_compile_stdcxx_11.m4'
aclocal: installing 'm4/ax_require_defined.m4' from
'/usr/share/aclocal/ax_require_defined.m4'
aclocal: error: too many loops
aclocal: Please contact <bug-automake@gnu.org>.
 at /usr/share/automake-1.15/Automake/Channels.pm line 662.
	Automake::Channels::msg("automake", "", "too many loops") called at
/usr/share/automake-1.15/Automake/ChannelDefs.pm line 212
	Automake::ChannelDefs::prog_error("too many loops") called at /usr/bin/aclocal
line 1188
autoreconf: aclocal failed with exit status: 255
------

Update FDDNM tool build process.

There was an update recently from upstream to autotools package. Problem appears
to have been worked out because of this.